Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810917.1_cds_XP_016496460.1_10678
CDS Infomation

[gene=LOC107815401] [db_xref=GeneID:107815401] [protein=SWI/SNF complex subunit SWI3A-like] [protein_id=XP_016496460.1] [location=complement(join(39680..39877,40153..40316,40472..40521,40987..41144,41457..41936,42801..42881))] [gbkey=CDS]
Sequence

ATGGATCAGCAAAAGAAGGAAAGTGTAGTGTGTGATAGTTGCAAAGAACAGTGTGCTTCG
GGTCATTATGAGTACATCAAGAATGCAAGCTATAATTTATGCGAGAAGTGCTTTAAAAGT
GGTAATTATGACAAGGACAAATTGGCAGATGAGTTCAAGTTGATGGATGGTGAGAACTCC
AAAGCTGTCTGGACTGAAGCAGAAACCCTACTCCTATTAGAATCTGCACTGAAGCATGGT
GATGACTGGGATCTTGTTGCTCAAAATGTCAAAACAAAGAGTAAACTGGATTGTATCTCA
AAGCTTATACAGTTGCCTTTTGGGGATCTTATGCTTGGTTCTATTCATAAAAAGATTAAA
CTTTTGGACACAAATGGCGAGGTAAGCACCGGGGATCAAGCTCAAGGTGCAATAAGTGAG
TCTGGAGAAACTCCTGGAAATCAATCTCATGAGCAGAACCAGGAGCATCAACAGAATGGA
GATGCTGAAACCGAAACTCCTCCTCTCAAGAAAATACGCAGGGCTCCAATTTCAGAAGCC
AGTAGTTTCCTGATGAAACAGGTAGCTCGGATCTCTGGTGCTGTTGGTCCACATATCACA
GCATCTGCAGCTGAGGCTGCTGTTACAGCCCTTTGCTACGAAAACCAGTGTTCAACTGAC
ATTTTTGATGAAGATGATGATGGATTGGGATCAATTGCTGATATCAGTGAGACAGAGAGA
GGGAGTCAAGACGAAAGTGCTAAAGGGGAGGAAAAGCCTGCCAGCTCAAAAACAGAGGTG
GCAGTCTCCCAGAGAAATACTATACCTCTAACTTTACGTATGAGGGCCGCAACAGCAACT
GCTCTCGGTGCTGCTGCTGCTCATGCCAAATTGTTGGCTGATCAAGAAGAGAGAGAAGTA
GAATATCAGGTTTCTACTTTAGTCGAAGCACAGGTGAAGAAGTTGCAACGTAAAATGAAA
CATGTCGAAGCTCTGAACCTGATGATGGAGAAGCAACATGCGCAAATGAAGGAATTAGAA
GAGTCTTTAGTTACAGAGAGAATGGACATTTTGCAGAAGATATTTAGTGTGGGGGTATCT
AGATGGAGTGATCATGCTTCTGCCAAATCTCAAAGTAGCAGCATAGCTTGA

Peptide Sequence

PEP ID

XP_016496460.1
PEP Infomation

PREDICTED: SWI/SNF complex subunit SWI3A-like [Nicotiana tabacum]
Sequence

MDQQKKESVVCDSCKEQCASGHYEYIKNASYNLCEKCFKSGNYDKDKLADEFKLMDGENS
KAVWTEAETLLLLESALKHGDDWDLVAQNVKTKSKLDCISKLIQLPFGDLMLGSIHKKIK
LLDTNGEVSTGDQAQGAISESGETPGNQSHEQNQEHQQNGDAETETPPLKKIRRAPISEA
SSFLMKQVARISGAVGPHITASAAEAAVTALCYENQCSTDIFDEDDDGLGSIADISETER
GSQDESAKGEEKPASSKTEVAVSQRNTIPLTLRMRAATATALGAAAAHAKLLADQEEREV
EYQVSTLVEAQVKKLQRKMKHVEALNLMMEKQHAQMKELEESLVTERMDILQKIFSVGVS
RWSDHASAKSQSSSIA

Transcript Sequence

Gene sequence data has not been registered.